PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g574610.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 1722aa MW: 187599 Da PI: 6.3392

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g574610.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.1	4.9e-09	804	847	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+eE el+++ + ++ +++Ia+ + ++t +c+++++k+ Pd.00g574610.m02 804 NPWTPEEKELFIEKLTTCRKD-FRKIASFLD-HKTTADCVEFYYKH 847 69***************99.*****.**********97 PP
2	Myb_DNA-binding	26	2.2e-08	1023	1063	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E +++av +G++ ++ I+r++ +R+ qck ++ Pd.00g574610.m02 1023 DWTDAEKSSFIQAVSSYGKD-FAMISRCVR-TRSQHQCKVFFS 1063 6***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1722 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPHHAPR DFNRWPSADF RRPPGHGKQG 60 GWHLFSEDSG HGYASSRSGD KMLEDESCRP SFSRGDGRYG RNSRDNRGSY SQRECKGHSW 120 ETSSGSPNTP GRPNDVINEQ RTQDDMLTYS SHPHSDFGST WDQIQLKDQL DRMGGSTGLG 180 AGQKCERENS LGSIDWKPLK WTRSGSMSSR GSGFSHSSSS KSIGAIDFNE AKVESQPKNA 240 TPMQSPSGGA TTCVTSAAPS EETTSRKKPR LGWGEGLAKY EKKKVEVPDG SMNKDGAVCS 300 VGNMEPVHSL SSNLADKSPR VTVFSDCASP ATPSSVACSS SPGVEEKSFG KTANCDNNNR 360 NFCGSPGPMF QSHHEGFTFN LEKLDCNSIA NLGSSLRELL QSDDPSSVDS GIVRPTAMNK 420 LLIWKGEISK VLEVTESEID SLENELKVLN SDSGGSCPRP ATSSSLPVED NDKSFKEQVT 480 VTNLITRPSP LQIHSSGDAD AENMCLGNGD QVEFCGIVKD EDIDSPGTAT SKFVEPLPLV 540 KVVSSSDLMS HNDCSGDLDP IETTKGEAKC LVPGKYEEKT DLSACGNSSM LLGSEIVAPV 600 SGGSGLCFSV VDTICDSICS SNKESANRSF DVFNKLLPRE HYKVDISGVS ISSSGKNDSL 660 IKEKFSMRKR RLRFMERVLT LKYKAFQHLW KEDLRLLSIR KYRPKSHKKF ELSLRATNNG 720 YQKHRSSIRS RFSTPGNLSL VPTTEIINFT NKLLSDSQVK LCRNSLKMPA LILDKKEKMV 780 TRFISSNGLV EDPCVVEKER ALMNPWTPEE KELFIEKLTT CRKDFRKIAS FLDHKTTADC 840 VEFYYKHHKS VCFEKTKKKA DMTKQGKSSA KTYLISNGKK WNREMNAASL DILGAASAIA 900 AHADGSMRSR QAYSERLFLG GYRNANPSQG DDTTVERSCS FDAIGNERET VAADVLAGIC 960 GSLSSEAVSS CITSSIDPGE GYREWKCQKV DSLARRPLMP DVMQNVDDET CSEESCGEMD 1020 PSDWTDAEKS SFIQAVSSYG KDFAMISRCV RTRSQHQCKV FFSKARKCLG LDLVHPVAGN 1080 GTSVGDDVNG GGSDTEDACV LETGSGISSD KSGCRMNEDM PLSVINMDDE SDPAETMNLQ 1140 TGPLRSEENN VMGQLDHEGG QTLKSPVSDA LEVEDRSNLV LDDADCVRDA QKSQVFSADA 1200 LKDDVAEEGI LIAESEPVGG GINFDPTNPG MDGEKLMGEL SSDGNTDTSR CSLPGSVHDS 1260 NSSGNASAPA GGGSCSGFSL NPECLHQVSV GLNSMQKPSV ISMPHETRHA PADSVSQDSA 1320 KIECEKAFNQ DRLSSTLDLQ EGREPKSVGI DECHQHLPGL PIYTNVESSQ VLKGYPLQMA 1380 TKKDTNGDVT SGNLSEVQNF SKPDRKINGH YMTKDGFLQF GNCKPQCSEV DFPLAPQKVE 1440 QPVGPPKAHS WSSSDSDKPS RNGDVKLFGK ILSNPSSLSK SSSNIHENEE KGAHNHKLSN 1500 TSSNLKFTGH HNADGNSSLL KFDCSSYLGI EKVPRRSYGF WEGNKVHSGY PSFSDSAILL 1560 AKYPAAFGNF PTTSSKMEQQ PLQAVVKNND RNINGVSVFP SREISGSNGV VDYPVFSRSR 1620 DGAKVPPFTV DVKQQQRQDV FDMPRRNGFD TISSLQQQGR GIVGMNVVGR GGILVGGPCT 1680 GVSDPVAAIR MHYAKTEQYG GQPGSMIREE ESWRGGKGDV GR

Sequence ? help Back to Top

Protein Sequence Length: 1722 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPHHAPR DFNRWPSADF RRPPGHGKQG  60
GWHLFSEDSG HGYASSRSGD KMLEDESCRP SFSRGDGRYG RNSRDNRGSY SQRECKGHSW  120
ETSSGSPNTP GRPNDVINEQ RTQDDMLTYS SHPHSDFGST WDQIQLKDQL DRMGGSTGLG  180
AGQKCERENS LGSIDWKPLK WTRSGSMSSR GSGFSHSSSS KSIGAIDFNE AKVESQPKNA  240
TPMQSPSGGA TTCVTSAAPS EETTSRKKPR LGWGEGLAKY EKKKVEVPDG SMNKDGAVCS  300
VGNMEPVHSL SSNLADKSPR VTVFSDCASP ATPSSVACSS SPGVEEKSFG KTANCDNNNR  360
NFCGSPGPMF QSHHEGFTFN LEKLDCNSIA NLGSSLRELL QSDDPSSVDS GIVRPTAMNK  420
LLIWKGEISK VLEVTESEID SLENELKVLN SDSGGSCPRP ATSSSLPVED NDKSFKEQVT  480
VTNLITRPSP LQIHSSGDAD AENMCLGNGD QVEFCGIVKD EDIDSPGTAT SKFVEPLPLV  540
KVVSSSDLMS HNDCSGDLDP IETTKGEAKC LVPGKYEEKT DLSACGNSSM LLGSEIVAPV  600
SGGSGLCFSV VDTICDSICS SNKESANRSF DVFNKLLPRE HYKVDISGVS ISSSGKNDSL  660
IKEKFSMRKR RLRFMERVLT LKYKAFQHLW KEDLRLLSIR KYRPKSHKKF ELSLRATNNG  720
YQKHRSSIRS RFSTPGNLSL VPTTEIINFT NKLLSDSQVK LCRNSLKMPA LILDKKEKMV  780
TRFISSNGLV EDPCVVEKER ALMNPWTPEE KELFIEKLTT CRKDFRKIAS FLDHKTTADC  840
VEFYYKHHKS VCFEKTKKKA DMTKQGKSSA KTYLISNGKK WNREMNAASL DILGAASAIA  900
AHADGSMRSR QAYSERLFLG GYRNANPSQG DDTTVERSCS FDAIGNERET VAADVLAGIC  960
GSLSSEAVSS CITSSIDPGE GYREWKCQKV DSLARRPLMP DVMQNVDDET CSEESCGEMD  1020
PSDWTDAEKS SFIQAVSSYG KDFAMISRCV RTRSQHQCKV FFSKARKCLG LDLVHPVAGN  1080
GTSVGDDVNG GGSDTEDACV LETGSGISSD KSGCRMNEDM PLSVINMDDE SDPAETMNLQ  1140
TGPLRSEENN VMGQLDHEGG QTLKSPVSDA LEVEDRSNLV LDDADCVRDA QKSQVFSADA  1200
LKDDVAEEGI LIAESEPVGG GINFDPTNPG MDGEKLMGEL SSDGNTDTSR CSLPGSVHDS  1260
NSSGNASAPA GGGSCSGFSL NPECLHQVSV GLNSMQKPSV ISMPHETRHA PADSVSQDSA  1320
KIECEKAFNQ DRLSSTLDLQ EGREPKSVGI DECHQHLPGL PIYTNVESSQ VLKGYPLQMA  1380
TKKDTNGDVT SGNLSEVQNF SKPDRKINGH YMTKDGFLQF GNCKPQCSEV DFPLAPQKVE  1440
QPVGPPKAHS WSSSDSDKPS RNGDVKLFGK ILSNPSSLSK SSSNIHENEE KGAHNHKLSN  1500
TSSNLKFTGH HNADGNSSLL KFDCSSYLGI EKVPRRSYGF WEGNKVHSGY PSFSDSAILL  1560
AKYPAAFGNF PTTSSKMEQQ PLQAVVKNND RNINGVSVFP SREISGSNGV VDYPVFSRSR  1620
DGAKVPPFTV DVKQQQRQDV FDMPRRNGFD TISSLQQQGR GIVGMNVVGR GGILVGGPCT  1680
GVSDPVAAIR MHYAKTEQYG GQPGSMIREE ESWRGGKGDV GR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-178	MYB family protein