PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g573510.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 545aa    MW: 59757.8 Da    PI: 6.6572
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g573510.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.6e-11303345754
                       HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       ++ErrRR+++N+++  Lr+++Pk +      K++ a+iL  A++Y+k+L
  Pd.00g573510.m01 303 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 345
                       79*********************66......****************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 545 aa     Download sequence    
MLEGDWYMNN VLNPTHHQDL HSLPNHRQPD IRDIACFSEN TLMLQPMDSS ASCSPSQAFS  60
LDPSPPQHLF PPKSCFSSLL NVVSTNPFDN GFDLGCDSGF LSSFQGNQPS NSSAFLGFTA  120
LNSQSQMGTP ELSSSAEFPT TRLLPAPNND TELDGDFSLT SFQGFDGSGG AQLLNRAKPQ  180
RPLHVFPPVG AHPTLFQKRA ALRQNSGCEG TDKLGNLEIS GPRYGGVLES LERKRKKNVE  240
GEMEEGSMDV SGLNYDSDEF NEYSQVEENV KNAGSNSNAN STVTGVDGDR KGKKKGLPAK  300
NLMAERRRRK KLNDRLYMLR SVVPKISKMD RASILGDAID YLKELLQRIN DLHNELESAP  360
PGSLLPPSSC FQPLTPTPPT LPCRVKEELC PSSFPSPKGQ SAKVEVRVRE GRTVNIHMFC  420
ARRPGLLLSA MRALDNLGLD IQQAVISCFN GFALDVFRAE QCRESQFLPE QIKAVLLDSA  480
GFHEMILCCP LCLSVDGKGR KGSSSPACIP FAFRLKIELL LAQVGDLKNR FCVVLGSPII  540
SDWSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1233237RKRKK
2293311KKKGLPAKNLMAERRRRKK
3305312ERRRRKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.11e-140bHLH family protein