PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g572010.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 550aa MW: 59394.2 Da PI: 7.3697

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g572010.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.6	3.3e-30	258	316	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r aed++++++tYeg+H h+ Pd.00g572010.m01 258 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAiGCPVRKQVQRLAEDKTILITTYEGNHSHP 316 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MEKQGRRHHI SPKLFHHSVS DCSFNASDDG LVDATNNTRL NLLTLNSGIS STSASDIHQN 60 SNNKLMTSLQ VELERLHEEN GELKTMLDQM TKSYSQLQAQ LLIAMQKQAQ NRLREPIKCE 120 ANGMLARQFM DPRPSAAADH VRDPSVAYSS GKTTADHEAF SSFAPSNLNI EVMSTERDQY 180 QRRLQTNINS AEEALDRSSQ CLGSPNYTSK SSDPNLFDDD NDEPKRSTDQ EQVPVADQIP 240 FRKARVSVRA RSEAPMISDG CQWRKYGQKM AKGNPCPRAY YRCTMAIGCP VRKQVQRLAE 300 DKTILITTYE GNHSHPLPPA ATAMANTTSA AAAMLLSGST TSNEAHQYHH HHLANSGFFS 360 NSQLPFFASS MATLSASAPF PTITLDLTQS PMQQFHRIPP PSSSTFPLPL HGYHQLMGGP 420 GHPIPGPTYL PPNYKAPPPP AGVSLGGQRS TSAHASGMIE TVSAAIASDP NFTAALAEAI 480 STIMGAPRPH QGHQGGININ DGDIANNNAA RGLVASTNNS PPSANIGLPP GSLQPGSPQL 540 PQSCTTFSTN

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MEKQGRRHHI SPKLFHHSVS DCSFNASDDG LVDATNNTRL NLLTLNSGIS STSASDIHQN  60
SNNKLMTSLQ VELERLHEEN GELKTMLDQM TKSYSQLQAQ LLIAMQKQAQ NRLREPIKCE  120
ANGMLARQFM DPRPSAAADH VRDPSVAYSS GKTTADHEAF SSFAPSNLNI EVMSTERDQY  180
QRRLQTNINS AEEALDRSSQ CLGSPNYTSK SSDPNLFDDD NDEPKRSTDQ EQVPVADQIP  240
FRKARVSVRA RSEAPMISDG CQWRKYGQKM AKGNPCPRAY YRCTMAIGCP VRKQVQRLAE  300
DKTILITTYE GNHSHPLPPA ATAMANTTSA AAAMLLSGST TSNEAHQYHH HHLANSGFFS  360
NSQLPFFASS MATLSASAPF PTITLDLTQS PMQQFHRIPP PSSSTFPLPL HGYHQLMGGP  420
GHPIPGPTYL PPNYKAPPPP AGVSLGGQRS TSAHASGMIE TVSAAIASDP NFTAALAEAI  480
STIMGAPRPH QGHQGGININ DGDIANNNAA RGLVASTNNS PPSANIGLPP GSLQPGSPQL  540
PQSCTTFSTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01720.1	3e-70	WRKY family protein