PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g570790.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 251aa    MW: 28204 Da    PI: 5.7055
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g570790.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY39.21.4e-12108142234
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST..T--- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpv 34 
                       dDg++WrKYGqK ++++++pr Y + +    +C++
  Pd.00g570790.m01 108 DDGHAWRKYGQKAIHNAKHPRDYLKASELilDCTS 142
                       8************************9987778876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MELSWPESVL SNRERVMEEL IQGREIASQL CREADGEIVS GDQIQGNSSG GGSADSSSWD  60
ANDAIIKSED FHEEISCKSA STLKDRRGSY KRRKTTHSWT RDTPALTDDG HAWRKYGQKA  120
IHNAKHPRDY LKASELILDC TSPRESSSFI RFGDIKQDHP FFSSFTSVKK EVVIKEEKPQ  180
PSDDHMMASH HHNHSSSGDY KVSPHLTAFK SSCPLSGLSS TIDPYDHEGD VMSGLIVGPY  240
YFDDEVLQYE F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-09WRKY family protein