PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g569970.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 536aa MW: 59583.4 Da PI: 7.305 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 103.7 | 1e-32 | 235 | 292 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDg+nWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d+++++i+Y+g+Hnh+k Pd.00g569970.m01 235 DDGFNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGHITQIVYKGSHNHPK 292 8****************************************.***************85 PP | |||||||
2 | WRKY | 105.9 | 2.1e-33 | 399 | 457 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts gCpv+k+ver+++d+++v++tYeg+Hnh+ Pd.00g569970.m01 399 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSVGCPVRKHVERASHDTRAVITTYEGKHNHD 457 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 536 aa Download sequence |
MTSSFTHLLT SNMNNMDSNI DQERTNWGLS DYSSGRLMDR NGNEIPKFKS LQPPSLPMSP 60 PPVSPSSYLA STPAFSPTDF FSSPMFLSFS NTLQSPTSGA FSSQIFDWMS NSKETQQGIE 120 REQKMFSEFS FQPETRPAAT SSSSFNIQSA SNMASVEESL KTEQQPWDFN RISRQADSLT 180 EKTGVKSEFE PLQIILPEIG TNQTNMQSNG PSGAPKPDSI HCTQSSQFVR EQKSDDGFNW 240 RKYGQKQVKG SENPRSYYKC TYPNCPTKKK VERSLDGHIT QIVYKGSHNH PKPQSTRRST 300 SQSIQGSSYG ISDQSVPTIS NPKIESVTMQ EDSSASIGED EFEQNSPLSN SGGAEDENEP 360 EAKRWKGENT NDQPFSAAGS RIVKEPRIVV QTTSEIDILD DGYRWRKYGQ KVVKGNPNPR 420 SYYKCTSVGC PVRKHVERAS HDTRAVITTY EGKHNHDVPA ARGSGSYSNG NRPASDNGSN 480 NNSNVSMAVR PLALPNHSNL SYLSSLQNTR QPTTERQSPY TLKMLQSEGS YGFPEF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 1e-110 | WRKY family protein |