PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g569800.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 517aa MW: 58548 Da PI: 4.522

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g569800.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	58.2	2e-18	70	127	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse.ng...krkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+p+ g k+ r +lg+f ta++Aa a+++a+++++g Pd.00g569800.m01 70 CVYRGVRQRT-WGKWVAEIREPNHsSGvskKNSRLWLGTFPTAYDAAFAYDEAARAMYG 127 68***999.******97778899566*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MTSEASDRDK KLRKRRNGCD SIEDTLAKWK NYNDRFDLAK DGVKKTQRAP SKGSKKGCMK 60 GKGGPENSDC VYRGVRQRTW GKWVAEIREP NHSSGVSKKN SRLWLGTFPT AYDAAFAYDE 120 AARAMYGGLA RLNFPQNTRK LKKYSNSVSS GTTKTTSSSF ESSTTYNNGD EAEGLDMSSK 180 CAMESSQFVV GKSKERSDFF EDCVHKEPKQ ETDCSVGFAT QDFEVLDATL REAKDVKCES 240 ETEYELARND AEETSVFQTG SYESFNRRPD YLHNELQVVN LDSVPDGKPY YNDWESWETL 300 LRSNNDYLNN ELVDVECNGR NDCNPSEDVN VEKPVTREAM EKEFPMILES GSHNDLDDSC 360 HYMHNEQINV ARNLVTADFE PSNDVEIKGS MTDQELQGGI VETTNLNGHN GFIDSYACSD 420 DIRPSNDIEM QENRLANLHN WSVEESYSID AQNQQWGRLP NLPNQLQTQP QVNIPGSLAH 480 MEEASLGIDF DVDLFRQNYD SGVLEEQVFH GSWFPYS

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MTSEASDRDK KLRKRRNGCD SIEDTLAKWK NYNDRFDLAK DGVKKTQRAP SKGSKKGCMK  60
GKGGPENSDC VYRGVRQRTW GKWVAEIREP NHSSGVSKKN SRLWLGTFPT AYDAAFAYDE  120
AARAMYGGLA RLNFPQNTRK LKKYSNSVSS GTTKTTSSSF ESSTTYNNGD EAEGLDMSSK  180
CAMESSQFVV GKSKERSDFF EDCVHKEPKQ ETDCSVGFAT QDFEVLDATL REAKDVKCES  240
ETEYELARND AEETSVFQTG SYESFNRRPD YLHNELQVVN LDSVPDGKPY YNDWESWETL  300
LRSNNDYLNN ELVDVECNGR NDCNPSEDVN VEKPVTREAM EKEFPMILES GSHNDLDDSC  360
HYMHNEQINV ARNLVTADFE PSNDVEIKGS MTDQELQGGI VETTNLNGHN GFIDSYACSD  420
DIRPSNDIEM QENRLANLHN WSVEESYSID AQNQQWGRLP NLPNQLQTQP QVNIPGSLAH  480
MEEASLGIDF DVDLFRQNYD SGVLEEQVFH GSWFPYS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	9	16	DKKLRKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11020.1	1e-27	ERF family protein