PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g566950.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 292aa MW: 33086.5 Da PI: 4.7975 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 34.9 | 3.1e-11 | 146 | 180 | 2 | 34 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST..T--- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpv 34 dDg+ WrKYGqK + +s+++r Y + + +C++ Pd.00g566950.m01 146 DDGHGWRKYGQKRILNSKHSRDYLKASELllDCTS 180 8************************9987778876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MTSHDNNVNR RARVEALRHM LYDVEAHLAV GGNRVLNLGG LIMEWSWPES VLSNGERVKE 60 ELMQGRELAE SDEEIVSGDQ IQGISGGGGS ADSSSWDANH TAAVIKSEDF YEESCKSTST 120 FKDGRGSYKR RKTSHCWTRD TPALTDDGHG WRKYGQKRIL NSKHSRDYLK ASELLLDCTS 180 PRESSNFIRF GDTKQDHPFF SFFTSVKKEE LVFKEESIIK EEIPPTSDDR VITSHDNHSW 240 LCDYLVSPDL TLFESSGPLN GFSSTLDEFD HEDVISRLMM GSFDLDEVLQ YI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 8e-08 | WRKY family protein |