PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g566950.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 292aa    MW: 33086.5 Da    PI: 4.7975
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g566950.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY34.93.1e-11146180234
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST..T--- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpv 34 
                       dDg+ WrKYGqK + +s+++r Y + +    +C++
  Pd.00g566950.m01 146 DDGHGWRKYGQKRILNSKHSRDYLKASELllDCTS 180
                       8************************9987778876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MTSHDNNVNR RARVEALRHM LYDVEAHLAV GGNRVLNLGG LIMEWSWPES VLSNGERVKE  60
ELMQGRELAE SDEEIVSGDQ IQGISGGGGS ADSSSWDANH TAAVIKSEDF YEESCKSTST  120
FKDGRGSYKR RKTSHCWTRD TPALTDDGHG WRKYGQKRIL NSKHSRDYLK ASELLLDCTS  180
PRESSNFIRF GDTKQDHPFF SFFTSVKKEE LVFKEESIIK EEIPPTSDDR VITSHDNHSW  240
LCDYLVSPDL TLFESSGPLN GFSSTLDEFD HEDVISRLMM GSFDLDEVLQ YI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.18e-08WRKY family protein