PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g565610.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 256aa MW: 29063.1 Da PI: 8.479 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.1 | 6.7e-13 | 85 | 137 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +h +Er+RR+++ + ++ Lr+ lP ++K s ++ + ++v+YIk+Lq Pd.00g565610.m01 85 KKIMHRDIERQRRQEMATLYASLRSQLPLeY---LKGKKSISDHVHQTVNYIKHLQ 137 5789*************************77...9********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MDYIPSNTLQ FDQALQQADE LFQISCLPYT EHTTQENQAL PPTPSQDGRD LTCRPTSGQK 60 RKASISSSNI TFGEIDDEQN PKGNKKIMHR DIERQRRQEM ATLYASLRSQ LPLEYLKGKK 120 SISDHVHQTV NYIKHLQSNI QELHNKRDRL KRSCDISCSS STSTAVTMEN SLSPMKESVV 180 LVRPCKAGVE VVVNTPMKQR LALSRLLEIL KREGLSTISC ISAQVNEKLI YTIESQVSDG 240 KCIDMFELQH RLTKNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 2e-46 | bHLH family protein |