PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g564910.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 305aa    MW: 33416.8 Da    PI: 9.324
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g564910.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.6e-20164214256
               AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                        y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g+
  Pd.00g564910.m01 164 NYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRGA 214
                       59*******.**********32....25**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MSLAFSPFTT TMNSKTMATV PFCHNPLTFH SPETFRFLSE ANSLYESFFS KTHFSVSSVS  60
FPNQLNIFNP PCHTNVSAEI PICGVSGKES ESQTETPPVL DGIAAVVGQH VLYGSQRTCN  120
VPTNGETTQI SEFGYCSEPV GSAETSKKDA DNKKGIGNLS VQKNYRGVRK RPWGRWSAEI  180
RDRIGRCRHW LGTFDTAEEA ARAYDAAARR LRGAKARTNF EIPSVFPLSS PCSSSSSSDA  240
KRVIRGKNNI KGLKSKRKCS VVTCVAHLFS EAPTHLRSQV MEIKENVELD LKLGVGVTDI  300
GKTSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.19e-20ERF family protein