PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g564760.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 181aa MW: 20424.1 Da PI: 6.8732 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.7 | 1.4e-18 | 7 | 54 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 +y+GVr+++ +g+Wv+eIr+p +r++lg+f tae+Aa+a+++a++ + Pd.00g564760.m01 7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAARLM 54 69******9.**********8.....334*********************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MARSHQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGTKAR 60 TNFSYNPDET MSHSSKLLSA ALIAKLHKCN MASLQMAKTT NNKPVPKEEP QQEVHYMPAA 120 PSATCIIETG DVSGFDWPEK IREYSGVQQW VEQGSWVGGG DQMIEELLDY GHIEICPGVS 180 T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25190.1 | 4e-34 | ERF family protein |