PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g563400.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 437aa MW: 49794.6 Da PI: 4.8602

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g563400.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114	9.5e-36	14	104	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d++ ++++swse+g sfvv+d++efak++Lp yFkh+nf+SFvRQLn+YgF+k++ e+ weF++++F +g ++ll Pd.00g563400.m01 14 FLTKTYDLVDDPSSNHVVSWSETGCSFVVWDPTEFAKEMLPMYFKHNNFSSFVRQLNTYGFRKIDPEQ---------WEFANEEFLRGGRHLL 97 9*************************************************************9998.........************ PP XXXXXXX CS HSF_DNA-bind 95 ekikrkk 101 +ki+r+k Pd.00g563400.m01 98 KKIHRRK 104 ***98 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MEGTQGGSNA PAPFLTKTYD LVDDPSSNHV VSWSETGCSF VVWDPTEFAK EMLPMYFKHN 60 NFSSFVRQLN TYGFRKIDPE QWEFANEEFL RGGRHLLKKI HRRKPIHSHS MQNHEYSSVP 120 LSETEREEYE KKINRLNHDK SLLELELQRH QRENQEFDYQ IQILQEQLQK MEHQQKQYTS 180 FLAQLLQKPG LASILMQKSE IHNKKRRLLT SSHFPDDFKM EILNLNTQNE NLGTISTPII 240 KLDQLEKMES SLNFWEDFLQ GIGEAMPEEV NDIGSLSQAS PIIVTEIQDP GMNSRPCSPR 300 SRLSSPNSMN VSSPEVIGSA NFLDILAITS TCHNVDFRPK SSGIDMNSKP DSAPAAEALK 360 EMVQEMKNAE PAAANDMFWE QCLTETPGLD DAQEVQSERG DSDGGVSDTN PAIQKKLWWN 420 TDVDNFTNQI GRLTPAS

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MEGTQGGSNA PAPFLTKTYD LVDDPSSNHV VSWSETGCSF VVWDPTEFAK EMLPMYFKHN  60
NFSSFVRQLN TYGFRKIDPE QWEFANEEFL RGGRHLLKKI HRRKPIHSHS MQNHEYSSVP  120
LSETEREEYE KKINRLNHDK SLLELELQRH QRENQEFDYQ IQILQEQLQK MEHQQKQYTS  180
FLAQLLQKPG LASILMQKSE IHNKKRRLLT SSHFPDDFKM EILNLNTQNE NLGTISTPII  240
KLDQLEKMES SLNFWEDFLQ GIGEAMPEEV NDIGSLSQAS PIIVTEIQDP GMNSRPCSPR  300
SRLSSPNSMN VSSPEVIGSA NFLDILAITS TCHNVDFRPK SSGIDMNSKP DSAPAAEALK  360
EMVQEMKNAE PAAANDMFWE QCLTETPGLD DAQEVQSERG DSDGGVSDTN PAIQKKLWWN  420
TDVDNFTNQI GRLTPAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	1e-79	HSF family protein