PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g562930.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 268aa    MW: 29265.6 Da    PI: 5.6759
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g562930.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.41.9e-3076135260
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                       +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY  eHnh+k
  Pd.00g562930.m01  76 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTMLLITYACEHNHPK 135
                       69*************************998****************************85 PP

Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MDPKFYRISP FGTDPADPDQ PMTSENGPGS PSSGEETKVA TAPSPKKRRG VQKRVVTVPI  60
GDVEGSKSKG EGHPPSDSWA WRKYGQKPIK GSPYPRGYYR CSSSKGCPAR KQVERSRVDP  120
TMLLITYACE HNHPKPTTKP HQTSTATSPN AEPELPAKIV THNDEELTIF ASQVDLDLSD  180
DSATLLSAFG WFSDVASTAV LESPICAGNS SCVDYDVATR LGDEEDEYLF ADLGELPEGS  240
VIFRHKMVES NEQNRRCSLS VVPCCNSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.23e-73WRKY family protein