PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g562930.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 268aa MW: 29265.6 Da PI: 5.6759 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.4 | 1.9e-30 | 76 | 135 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY eHnh+k Pd.00g562930.m01 76 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTMLLITYACEHNHPK 135 69*************************998****************************85 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 268 aa Download sequence |
MDPKFYRISP FGTDPADPDQ PMTSENGPGS PSSGEETKVA TAPSPKKRRG VQKRVVTVPI 60 GDVEGSKSKG EGHPPSDSWA WRKYGQKPIK GSPYPRGYYR CSSSKGCPAR KQVERSRVDP 120 TMLLITYACE HNHPKPTTKP HQTSTATSPN AEPELPAKIV THNDEELTIF ASQVDLDLSD 180 DSATLLSAFG WFSDVASTAV LESPICAGNS SCVDYDVATR LGDEEDEYLF ADLGELPEGS 240 VIFRHKMVES NEQNRRCSLS VVPCCNSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G58710.2 | 3e-73 | WRKY family protein |