PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g562240.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bZIP

Protein Properties

Length: 375aa MW: 41297.4 Da PI: 6.5566

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g562240.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42.9	1.1e-13	234	293	4	62
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevaklkse 62 +r+rr++kNRe+A rsR+RK+a++ eLe + Le+eN++L k+++e+ ++ ++l + Pd.00g562240.m01 234 QQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEENEQLlKEKAERTEERRKQLMEK 293 58**************************************98245577777777766555 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MASSKLVSSS SRSRNSDLSR RPSSNSPATK PKPSATPSSS SAHPQNLNNH SNGISDYHSA 60 NTTSSMPIGS MTIDGLLYDP NPTPMTDATL LDAQITLMNT ASAAEMNSSS AAVPQKTVDE 120 VWREIVSGEA RKGCKEEVPD DLMTLEDFLA RAGAVEEDDI KDMPLAMPPP ETERLSGGVF 180 SFDPMPQLSP FSSIDKVEGS IIGFGNGVEM VGSGGVGRGK RGRAVLEPMD KVAQQRQRRM 240 IKNRESAARS RERKQAYQVE LESLAVRLEE ENEQLLKEKA ERTEERRKQL MEKVIPVVEK 300 RRPARALRRE EKRDCNPSHE RAFLVTEEKD GVNEGDRGAT TFWCVQIGTS TKALRATKPF 360 KVEEVSKLPE ERIAV

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MASSKLVSSS SRSRNSDLSR RPSSNSPATK PKPSATPSSS SAHPQNLNNH SNGISDYHSA  60
NTTSSMPIGS MTIDGLLYDP NPTPMTDATL LDAQITLMNT ASAAEMNSSS AAVPQKTVDE  120
VWREIVSGEA RKGCKEEVPD DLMTLEDFLA RAGAVEEDDI KDMPLAMPPP ETERLSGGVF  180
SFDPMPQLSP FSSIDKVEGS IIGFGNGVEM VGSGGVGRGK RGRAVLEPMD KVAQQRQRRM  240
IKNRESAARS RERKQAYQVE LESLAVRLEE ENEQLLKEKA ERTEERRKQL MEKVIPVVEK  300
RRPARALRRE EKRDCNPSHE RAFLVTEEKD GVNEGDRGAT TFWCVQIGTS TKALRATKPF  360
KVEEVSKLPE ERIAV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	300	313	KRRPARALRREEKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44080.1	1e-44	bZIP family protein