PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g560100.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 339aa    MW: 38685.4 Da    PI: 7.3587
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g560100.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.47.2e-1532118296
                       EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       +k +++s+v++ ++l+lpk+f+  h       ++tltle esg+++++ +    +++  +l++GWk+F  a++L++gD +v++l++  +f  +
  Pd.00g560100.m01  32 VKSMIHSNVSSWNCLTLPKQFCHLHlP---LYDTTLTLEVESGEKYRIIF--LAGKR--ILSAGWKKFRTAHKLRVGDLLVLRLVRPLKF--K 115
                       6899******************66642...45679***************..55543..69**********************9986666..4 PP

                       EEE CS
                B3  94 vkv 96 
                       v +
  Pd.00g560100.m01 116 VYI 118
                       444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MVDNFNEHEK SSASTQVEEI QAILGAEYPI VVKSMIHSNV SSWNCLTLPK QFCHLHLPLY  60
DTTLTLEVES GEKYRIIFLA GKRILSAGWK KFRTAHKLRV GDLLVLRLVR PLKFKVYIMG  120
RHNLAEVDAA FSLLKLNACA KHEVLEENHP KPLSRDVCQG NIRKTSLMLD TKPELIDNQT  180
EEDNEEFGSK FPGGIRYPVP AADFEDVRSI ENFTILVNGV TIDSWLSKQL RTNYYDLCSS  240
QGSFLHDHLL KSINTKLAAE IITETTNIAN AIRARKLSAS HADYEMWEKT LNAFELLGMD  300
VGFLHERLKR LLSLSFRSEE AVELKRREDK VEQICARGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.14e-19B3 family protein