PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g557740.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 300aa    MW: 33262 Da    PI: 10.1446
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g557740.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.41.2e-11555146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                      +++WT+eE+  l+ +v ++G g W+tI +          R+  ++k++w++
  Pd.00g557740.m01  5 KQKWTAEEEAALKAGVVKHGAGKWRTILKDPEysgvlYSRSNVDLKDKWRN 55
                      79****************************99999***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MGAPKQKWTA EEEAALKAGV VKHGAGKWRT ILKDPEYSGV LYSRSNVDLK DKWRNMSVMA  60
NGWGSREKAK TAVRRMHPVP KQEENSMALS TVVQSDEDVM DAKPIAFSSD TQQTSGPKRS  120
IVRLDNLITE AITSLKEPGG SNKTTIAAYI EEQYWAPPDF KRLLSAKLKY LTSSRKLIKV  180
KRRYRIAPTP AFSEKRRNSS MYPFEGRQMV SPKFDKDDAT MLMKAQIDLE LAKMRTMTPR  240
EAAAAAARAV EEAEAAIAEA EEAAREAEAA EADADAAQAF ADAAMKTLKG RNSAKMMNRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-104MYB_related family protein