PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g556780.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 430aa    MW: 47567.1 Da    PI: 6.1253
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g556780.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.62.3e-13167213455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        h ++Er+RR+++ ++f  L  ++P +     kK++Ka++L  A++YIk+Lq
  Pd.00g556780.m01 167 DHIIAERKRREKLSQRFIALSAMVPGL-----KKMDKASVLGDAIKYIKQLQ 213
                       699************************.....9******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MAISSIGGMS ELGMEDPYFI NQWHMNSLDE VSMLPLAAAF GENFNQSHFH PNFNLKTSMD  60
SSHSGIDRPM KQLKTDGWSS CKTDQHGSNP QVASSPNILS FVNSNSINQM GVLKPKEEAA  120
VCSNSNNSLP SDILLSQSSF GNQSYLFKAS QGTKGVNTNT RLSTTQDHII AERKRREKLS  180
QRFIALSAMV PGLKKMDKAS VLGDAIKYIK QLQDKVKTLE EQTRKKNMES VVFVKKTQLF  240
ANDDNSSSEE NNSSGPFDET LPEIEARFCD NNVMIRIHCE KRKGVVEKTI AEVEKLQLKF  300
INSSVLTFGG CALDVTIIAQ MEVEFSLSVK ELVKNLRSAF DMFMYSYASS AGFGDCVDGG  360
GFPEWRTKPE TVRMHFEVLA KVDGDKIVPE RVVPINPVVL EDTVAPNELL GNVSMSTVPI  420
VYPPANPLTL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1172177ERKRRE
2173178RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-64bHLH family protein