PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g556470.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 339aa MW: 38215.1 Da PI: 8.9674

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g556470.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.3	3.2e-09	59	106	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + rE+ RRdr+N+ f eL +l ++ +K++Ka+iL +++ +k+L Pd.00g556470.m01 59 IQKADREKLRRDRLNEQFLELGNVLDPD----RPKNDKATILADTIQVLKDL 106 56789*****************9997....79*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MGQQLKHEGF IQSAPPPFPS AIEFPQPPSD SRAPSGCSQP NSSERPEGET KDCLTARKIQ 60 KADREKLRRD RLNEQFLELG NVLDPDRPKN DKATILADTI QVLKDLTSEV DKLKADCASL 120 TEESRELTHE KNDLREEKAS LKSDIENLNA QYQQRLRAMF PWGAMDHSVP YHYFPNQNPG 180 VIPNPCSTFV PYVTPNTLVE QQSTQYVSPV VHPRSRSHVS GKQDSRNKLS GESKIDRSED 240 SNDVTTELEL KTPGSMTDQD LSSVRRKSQK SARKETKLVA QKLMTKKRKG VFLHEGGKGC 300 WLVFINKLSR IEAAAGIFRD SFVLRVKVNK GKYCHELGE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	281	289	QKLMTKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19860.1	1e-85	bHLH family protein