PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g555920.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 588aa    MW: 65941.8 Da    PI: 4.9973
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g555920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.71.8e-12351392854
                       HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH   8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       +Er+RR+++N+++ +Lr+l+P+ +      K++Ka+iL  A++Y+k+L
  Pd.00g555920.m01 351 AERKRRKKLNERLYRLRSLVPNiS------KMDKAAILGDAIDYVKDL 392
                       7*********************66......****************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 588 aa     Download sequence    
MQNLTERLRP LVGLKGWDYC VIWKLSENQR FIELMDCCCS GADENTQTNG GQELLFPVYP  60
VLPCRDTMQH SRTNSCDVLV HLPSSLSLDS GIYAHPLISN QPIWLNSSSN RDSSAMAERD  120
GTRVLVPSAG GLIELFVSKD VSEDQQVIDY ITAQCNISKE QDTLLGAGCN TSFPVNINDM  180
STEIQPHVFP GNENEGNDHL NSNHFQQPPV VSPSVDHDSN VPYDISVDRI RLCSASPMNF  240
LQHVTYNSEN SMKNGNSNVY YEQRSHESLG GMGLQADADA SNMHNSMHVM EALENMEQQG  300
VEDQDSVKHE AQGGRTADNS GSDCSDQIDD EDDTKYRRRT GKGPQSKNLF AERKRRKKLN  360
ERLYRLRSLV PNISKMDKAA ILGDAIDYVK DLLRQVKELQ DELEQHSNDE GPNTKTSANI  420
CGNHNNFQPE ILNQNGTSIT NEPENDDKPP NGFHPQVGVT QLDGNELFVT VFCEHKPGGF  480
VRLMEALDTL GLEVTNANVT SFRSLVSNVL KVEKKDSEVV QADDVRDSLL EITRNPSSKV  540
WPEMAKAKAS ENGSGLDHFH HDDQHHYQQH HLHNYHASSY HLQHLYNY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1337358RRRTGKGPQSKNLFAERKRRKK
2352359ERKRRKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16910.11e-109bHLH family protein