PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g555920.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 588aa MW: 65941.8 Da PI: 4.9973 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.7 | 1.8e-12 | 351 | 392 | 8 | 54 |
HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +Er+RR+++N+++ +Lr+l+P+ + K++Ka+iL A++Y+k+L Pd.00g555920.m01 351 AERKRRKKLNERLYRLRSLVPNiS------KMDKAAILGDAIDYVKDL 392 7*********************66......****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 588 aa Download sequence |
MQNLTERLRP LVGLKGWDYC VIWKLSENQR FIELMDCCCS GADENTQTNG GQELLFPVYP 60 VLPCRDTMQH SRTNSCDVLV HLPSSLSLDS GIYAHPLISN QPIWLNSSSN RDSSAMAERD 120 GTRVLVPSAG GLIELFVSKD VSEDQQVIDY ITAQCNISKE QDTLLGAGCN TSFPVNINDM 180 STEIQPHVFP GNENEGNDHL NSNHFQQPPV VSPSVDHDSN VPYDISVDRI RLCSASPMNF 240 LQHVTYNSEN SMKNGNSNVY YEQRSHESLG GMGLQADADA SNMHNSMHVM EALENMEQQG 300 VEDQDSVKHE AQGGRTADNS GSDCSDQIDD EDDTKYRRRT GKGPQSKNLF AERKRRKKLN 360 ERLYRLRSLV PNISKMDKAA ILGDAIDYVK DLLRQVKELQ DELEQHSNDE GPNTKTSANI 420 CGNHNNFQPE ILNQNGTSIT NEPENDDKPP NGFHPQVGVT QLDGNELFVT VFCEHKPGGF 480 VRLMEALDTL GLEVTNANVT SFRSLVSNVL KVEKKDSEVV QADDVRDSLL EITRNPSSKV 540 WPEMAKAKAS ENGSGLDHFH HDDQHHYQQH HLHNYHASSY HLQHLYNY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 337 | 358 | RRRTGKGPQSKNLFAERKRRKK |
2 | 352 | 359 | ERKRRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16910.1 | 1e-109 | bHLH family protein |