PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g554580.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 768aa MW: 83864.7 Da PI: 6.0589

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g554580.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.6e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ +++da k++G W +I +++g ++t+ q++s+ qk+ Pd.00g554580.m01 24 RERWTEEEHNRFLDALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 768 aa Download sequence
MDTLSSGEDL VIKARKPYTI TKQRERWTEE EHNRFLDALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEAHNKG VLAGQSIDID IPPPRPKRKP SNPYPRKSCS AARTWATSHV 120 AEKDGKLLSS ASSSHCKQVV DLEKEPLDER PTKEENPRNG KENQDENCSE VLTTLLEDHC 180 SSVSSANKNS IPTQVALRNA CTFTDFVPSL KEVISQDVTN DSYVTTELNG NQNLKKNDAK 240 KIVQDNGTSG ASESENTNAF HKKLVQGEKA DDLNCALPTD GMQGTQTYPR NVPVHVLDGS 300 LGACNQITPA DRSFADTAFH PMGKVHGQPN LFANPTASTT TEHESNASRS SVHQSFPAFH 360 PPFTPFHHGQ KDYQSFLHMS TFSSLIVSSL LQNPAAHAAA SFAATFWPYA NAENTEDSPT 420 CPPGGFPSRQ MNSPPSMAAI AAATVAAASA WWASHGLLPL CAPVQTAFSC PPVSMTGVPS 480 MDTGEAPAAN IERGENSLQI PSLQDQQVDP EHLEAVEAQH PASKSPSVSS SHSDNGGAEP 540 NTVLKAASDE KVVASTEEVN DSNNAKSRKQ VDRSSCGSNT PSSSEVETDA LEKQENGKEE 600 LKEPDLNHPA SDSTYRRSRS IINISDPWKE VSEEGRMAFQ ALFSREVLPQ SFSPPPKDKE 660 HQTTTEEGKQ NAEEKDEDAS LLDLNKKTWV PFSCHPEVEK NVLPVGDNNA EGLLTIGLSQ 720 GKLKARRTGF KPYKRCSVEA NENRAANAIS HCEEKGPKRL RLEGEAQN

Sequence ? help Back to Top

Protein Sequence Length: 768 aa Download sequence

MDTLSSGEDL VIKARKPYTI TKQRERWTEE EHNRFLDALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEAHNKG VLAGQSIDID IPPPRPKRKP SNPYPRKSCS AARTWATSHV  120
AEKDGKLLSS ASSSHCKQVV DLEKEPLDER PTKEENPRNG KENQDENCSE VLTTLLEDHC  180
SSVSSANKNS IPTQVALRNA CTFTDFVPSL KEVISQDVTN DSYVTTELNG NQNLKKNDAK  240
KIVQDNGTSG ASESENTNAF HKKLVQGEKA DDLNCALPTD GMQGTQTYPR NVPVHVLDGS  300
LGACNQITPA DRSFADTAFH PMGKVHGQPN LFANPTASTT TEHESNASRS SVHQSFPAFH  360
PPFTPFHHGQ KDYQSFLHMS TFSSLIVSSL LQNPAAHAAA SFAATFWPYA NAENTEDSPT  420
CPPGGFPSRQ MNSPPSMAAI AAATVAAASA WWASHGLLPL CAPVQTAFSC PPVSMTGVPS  480
MDTGEAPAAN IERGENSLQI PSLQDQQVDP EHLEAVEAQH PASKSPSVSS SHSDNGGAEP  540
NTVLKAASDE KVVASTEEVN DSNNAKSRKQ VDRSSCGSNT PSSSEVETDA LEKQENGKEE  600
LKEPDLNHPA SDSTYRRSRS IINISDPWKE VSEEGRMAFQ ALFSREVLPQ SFSPPPKDKE  660
HQTTTEEGKQ NAEEKDEDAS LLDLNKKTWV PFSCHPEVEK NVLPVGDNNA EGLLTIGLSQ  720
GKLKARRTGF KPYKRCSVEA NENRAANAIS HCEEKGPKRL RLEGEAQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.4	1e-118	MYB_related family protein