PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g553030.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 247aa MW: 26624.6 Da PI: 9.0909 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.1 | 2.9e-20 | 117 | 167 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+W+AeIrd + + +r++lg+f tae Aa+a+++a+++++g+ Pd.00g553030.m02 117 RYRGVRQRP-WGKWAAEIRDpF-----KaTRVWLGTFETAEAAAQAYDEAALRFRGN 167 7********.**********66.....56*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MSAMVSALAH VVAGDEELAA TESSLVINRQ SEDVGGGLIS SSVGGSDSGT KRGREEEEGG 60 GGQSVTRLCR AFGEFPQRSS SPVLGEGSST TPPTQTAFPP STFVYSATQI AEPIRRRYRG 120 VRQRPWGKWA AEIRDPFKAT RVWLGTFETA EAAAQAYDEA ALRFRGNKAK LNFPENVRLR 180 TPIADSLTTQ LNNSAPPNTL LSVATSTEPI VHSQALQSMQ HSSHEASRNL LSYSHGGLEV 240 NPRRRTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50080.1 | 7e-28 | ERF family protein |