PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g553030.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 246aa    MW: 26495.5 Da    PI: 9.5564
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g553030.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.9e-20116166256
               AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                       +y+GVr+++ +g+W+AeIrd +     + +r++lg+f tae Aa+a+++a+++++g+
  Pd.00g553030.m01 116 RYRGVRQRP-WGKWAAEIRDpF-----KaTRVWLGTFETAEAAAQAYDEAALRFRGN 166
                       7********.**********66.....56*************************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MSAMVSALAH VVAGDEELAA TESSLVINRQ SEDVGGGLIS SSVGGSDSGT KRGREEEEGG  60
GGQSVTRLCR AFGEFPQRSS SPVLGGSSTT PPTQTAFPPS TFVYSATQIA EPIRRRYRGV  120
RQRPWGKWAA EIRDPFKATR VWLGTFETAE AAAQAYDEAA LRFRGNKAKL NFPENVRLRT  180
PIADSLTTQL NNSAPPNTLL SVATSTEPIV HSQALQSMQH SSHEASRNLL SYSHGGLEVN  240
PRRRTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.17e-28ERF family protein