PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g552520.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 346aa    MW: 37231.5 Da    PI: 8.1437
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g552520.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM25.14.7e-08244317673
               NAM   6 rFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkr 73 
                       +F+P+d el+ e+L++k+   +    + ++e+i+++d    iy+ +P +Lp   k++ ++ +fF+k+ ++ atg+ 
  Pd.00g552520.m02 244 HFDPSDAELL-EHLAAKCGVGNrkphMFIDEFIPTLDgdngIYYDHPANLP-GSKNDGSSFHFFHKTINAFATGHT 317
                       6*********.899999766554565444456777766677**********.556778899******999988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MSFASFSGNN STGSCLNFSI MAQNPAIFQS LPDMAQQGYK VGLAPQAVQK KNHQISERKT  60
GGGSNNADDG LKAASGKSSS SIGQRQTLVF DNSARTLNFM SSHVTGSWPS RSIALTTTAT  120
NAPVDSKTSS NSQQQHMFQF QLQKPHMLQQ QQPAIAAKFP KNSACFVSNA VADSATALNN  180
SLSGKLPAEI GNLSNLQIFN IASNHLSGEI SGELPPRLEY LNLSSNSFSG EIPKSIVNLT  240
GLQHFDPSDA ELLEHLAAKC GVGNRKPHMF IDEFIPTLDG DNGIYYDHPA NLPGSKNDGS  300
SFHFFHKTIN AFATGHTGRD KVYNLAFGIY EVNHYVRLVG FVSSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.12e-25NAC family protein