PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g551210.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | AP2 | ||||||||
Protein Properties | Length: 196aa MW: 22747.5 Da PI: 10.5434 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.5 | 5.3e-16 | 51 | 110 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n+ k+ ++++lg ++++e Aa ++ a++k++g Pd.00g551210.m01 51 SIYRGVTRHRWTGRFEAHLWDkSSWNNiqnKKgRQVYLGAYDSEEAAAHTYDLAALKYWG 110 57*******************777799977447*************************98 PP | |||||||
2 | AP2 | 29.2 | 2.3e-09 | 153 | 186 | 1 | 37 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfg 37 s+y+GV +++ +grW+A+I + g +k+ +lg++ Pd.00g551210.m01 153 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYK 186 89****99**********99966...3.6********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MVLLPWPETP HLNQAENQKP KAKRIRKNQN NPTEKCQNGT NPNTGGGRRS SIYRGVTRHR 60 WTGRFEAHLW DKSSWNNIQN KKGRQVYLGA YDSEEAAAHT YDLAALKYWG PGTTLNFPIE 120 TYTKELEEMQ KASREEYLAS LRRRSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL 180 YLGTYKLDAA NFQLLY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 2e-82 | AP2 family protein |