PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g547580.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 418aa MW: 47727.9 Da PI: 7.5465 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 33.9 | 5.7e-11 | 24 | 108 | 10 | 99 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 vl+++ l +p + ++++g + t l+ +++ +W ++l +k+ g+++l++GW++F++ L g +++F+++g+ s f v++f + Pd.00g547580.m01 24 VLSKDVLKFPESVVTKYGDC--LGDTAFLKVPNNAVWPIEL--TKRNGQVWLQQGWSNFADFYSLAFGYVLLFSYEGNhSHF--QVRIFMR 108 56788889999999999755..6679***************..9********************************998888..8888865 PP | |||||||
2 | B3 | 39.8 | 8.2e-13 | 155 | 240 | 9 | 99 |
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +l+ g l +p + ++g + t ++ ++g W ++l ++++++++l++GW eF+k+ L++g f+vF++ g ++ +l +++frk Pd.00g547580.m01 155 RTLQDGKLEIPIIAVHTYGDYMAD--TAYFNVPDGSIWPIEL--TRRDREIWLGRGWPEFAKSYSLEDGCFLVFSYAG-KCSHLQLRIFRK 240 556667788999999888666444..89**************..********************************99.777789999998 PP | |||||||
3 | B3 | 58.7 | 1.1e-18 | 315 | 413 | 2 | 98 |
EEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS. CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr. 87 + +++++ +++ l+++ +f+++h + ++ +tl+ ++ ++W+v++ ++ ++gr + + GW+ Fv++n+L+egD +vF+l+++ Pd.00g547580.m01 315 TVIRMQPSYVRNH-LRISSSFVKKHilsD----GECNVTLQISDKKTWSVRCLIDVYGGRlsaRLQRHGWQAFVRDNQLEEGDACVFELIEKa 402 5566778888888.***********6432....33479999999********9999998866444559**********************988 PP SEE..EEEEE- CS B3 88 sefelvvkvfr 98 + +l+v++fr Pd.00g547580.m01 403 PKIKLRVRIFR 413 *********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 418 aa Download sequence |
MGSSSRHGKG LAFLVDSRSF FKIVLSKDVL KFPESVVTKY GDCLGDTAFL KVPNNAVWPI 60 ELTKRNGQVW LQQGWSNFAD FYSLAFGYVL LFSYEGNHSH FQVRIFMRSP LEIDYFGSTV 120 KEEDNLNGEM DYSNSPESPA SLMNAPSFFK IVLERTLQDG KLEIPIIAVH TYGDYMADTA 180 YFNVPDGSIW PIELTRRDRE IWLGRGWPEF AKSYSLEDGC FLVFSYAGKC SHLQLRIFRK 240 NTLEMEYNSS SDDTEDNSNT SCDQTEGEKR THGGDGGKTA SHKSTEVDLR TAKLESWKGR 300 AFAKASSFKY DNPFTVIRMQ PSYVRNHLRI SSSFVKKHIL SDGECNVTLQ ISDKKTWSVR 360 CLIDVYGGRL SARLQRHGWQ AFVRDNQLEE GDACVFELIE KAPKIKLRVR IFRDKDQV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 5e-17 | B3 family protein |