PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g541000.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 352aa    MW: 38707 Da    PI: 6.1808
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g541000.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY924.6e-29170230259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dg++WrKYGqKe+ gs+fpr+YYrCt++   +Cp+kk+v+r ++dp ++e++Y+geH+++
  Pd.00g541000.m01 170 EDGFTWRKYGQKEIMGSRFPRGYYRCTHQklyNCPAKKQVQRLNNDPLTFEVMYRGEHTCH 230
                       7****************************999***************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MDENTISLIL QACSLARDLE SNLPNLANQP NLLSNSLDEI TKKFVTARDR VHGQDPSPSS  60
SLHNMLTLAH QQQIGTSHVQ EWLRSSYAQQ AMDIFQTQLV ADQKEAKIGG CIDDDDAEVK  120
GLQAMDMVSA SDTNIASSSS QRPRRRKDQG LISKITVPAP RMGNTEIPPE DGFTWRKYGQ  180
KEIMGSRFPR GYYRCTHQKL YNCPAKKQVQ RLNNDPLTFE VMYRGEHTCH MSATAPSIPP  240
PSAEHHNATQ EGMAQTLAIT TTTDPPTTSL WLSMDFNPIR GGGGSSSRMT GGDRGGGDGV  300
GTSTTTRYGK EVDFPVVDLA DAMFNSGSSS SNSMDFIFHS AENKWDSEDK KN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143147PRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.13e-48WRKY family protein