PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g540300.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 313aa    MW: 33788.2 Da    PI: 9.8151
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g540300.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding331.4e-10101137339
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 
                       +WT+eE+  ++ + k+lG+g+W+ Iar + ++Rt+ q
  Pd.00g540300.m01 101 PWTEEEHRVFLAGLKKLGKGDWRGIARNFVTTRTPTQ 137
                       8*****************************99*9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MVKESMRKCS HCGHNGHNSR TCNNNGHGHG QNKGVCLKLF GVNIMEKEDD SMKKSYSMGN  60
LQAAGHNNNV VTIDHDAGYL SDGLIHNKKH KAAHERKKGR PWTEEEHRVF LAGLKKLGKG  120
DWRGIARNFV TTRTPTQDQG HQDSPISPTR TATETSSEGS SSKVLPQKIN TANSSPPKAS  180
VPSQILNRFP HLCLDSPPAA PVSPPCNVPN YPAVSYMMGI PENVPYAPMM HFARPSYHYM  240
IKTHGNFATC APVISHPSGI PSPRSLPSSP SMAGHIGMSS PAEKDALELK IGQPQPSQGA  300
NLSSPTSGAI RVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.14e-46MYB_related family protein