PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g540250.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 250aa MW: 28229.7 Da PI: 7.5258 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.6 | 3.7e-19 | 115 | 165 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg++ t eeAa a+++a+ +++g Pd.00g540250.m01 115 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETSEEAALAYDRAAYRMRG 165 7********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MPCLTEQWGD LPFKVDDSED MIVYSSLNDA LSFGWFPDHS LYEYVKPEPL LYDPFDHHHA 60 LPNLFTQFQQ YHDVNNAPVI LPFEHHHHHD QKQVQVVDAA DQNKAPKSGV ARGRHYRGVR 120 QRPWGKFAAE IRDPAKNGAR VWLGTYETSE EAALAYDRAA YRMRGCKALL NFPHRIGLNE 180 PPPVRVTGKR KEPEAEAAAA ADASTTTPKS AKRTKASSVA EHDHHQANVL RTRQKNSMGL 240 LPLGEQLLVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 5e-54 | ERF family protein |