PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g540230.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 25846.8 Da PI: 5.4032 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.3 | 8.1e-18 | 135 | 185 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp k +r++lg+f+t +Aaka++ a+ kl+g Pd.00g540230.m01 135 HYRGVRRRP-WGKYAAEIRDP---ArKGTRIWLGTFDTDVDAAKAYDCAAFKLRG 185 7********.**********8...4445**********99*************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
METPTHEEQD ESTLELIRQH LLGDFTFTDG FFSHLNFQIT DDDFSYDFQP LVVKPECSLS 60 ESESTSPISD PHCHNPQPCN FETKPETIIS PSIKVEPLNM SSPTKGKTTT SDCATPCSPD 120 DKFQQVSGSG EVLRHYRGVR RRPWGKYAAE IRDPARKGTR IWLGTFDTDV DAAKAYDCAA 180 FKLRGRKAIL NFPLEAGQSS QPPVNTARKR RRSVKQEEEE LPETELLKP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 208 | 212 | RKRRR |
2 | 208 | 213 | RKRRRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07580.1 | 2e-44 | ERF family protein |