PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g538760.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 260aa MW: 28306.4 Da PI: 6.3038 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.6 | 0.00053 | 152 | 189 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ ++++ L++l+ + +K + a++L +A+ YI+ L Pd.00g538760.m01 152 RKEKLGERIAALQQLVSPF-----GKTDTASVLHEAMGYIRFL 189 77788899********998.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MAENDGLEGD HLAVTEGTSF SQLLFAADEV CGLGVDDETF DYTHSSAYST QIKPPKMLCF 60 GNYDHSHGDG LEIGFSETAK KSGVTCSDSS SVYSTSNTSI NALPKSNNKR RNGLGQESVQ 120 CASTISTTMI ASQRTSKKTK SENHTSTGNA KRKEKLGERI AALQQLVSPF GKTDTASVLH 180 EAMGYIRFLH DQVQVLCSPY LQRLPTLPDG EMEEARKDLR SRGLCLAPVE YTMHVTNNNG 240 ADFWSPAMAN NNNNVSSTKY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19500.1 | 1e-46 | bHLH family protein |