PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g538110.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 357aa MW: 39718.5 Da PI: 4.7986 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.5 | 6.3e-10 | 287 | 327 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR++iN ++ L+ l+P+ +K++ +++Le+Av+Y+k Lq Pd.00g538110.m01 287 RKRREKINARLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 327 9******************97.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence |
MEDAGWSSHG GMYTSDEEAD FMSQLLANCS VTNEMNEASS SATPFAICPS HEYSTTNRED 60 IDQGSHYYSD FDNLYFSNGI DTYGTANNGN YYTSDSHQIM PTNYHNSETS RGLWDANGAN 120 LFLSQGEQFG MDHHQELRNG NVEEHSNTNQ TGAAFSENLL QLKRESQHEM RIREPEMEIE 180 VMVPENSKKR PCSSVEVQKK KRNVKSKKGQ KPVLTGDIED NDASTKGQSS SSTSCSGDED 240 SNASHQDLSG GVSPSNLSPK GLEDLNLNCQ KKASRGSATD SQSIYARKRR EKINARLRIL 300 QNLVPNGTKV DISTMLEEAV QYVKFLQLQI KLLSSDDMWM YAPIVYNGIN IGIELNS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 188 | 202 | KKRPCSSVEVQKKKR |
2 | 287 | 292 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14760.1 | 2e-49 | bHLH family protein |