PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g536970.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 344aa MW: 38327.6 Da PI: 7.1674

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g536970.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42	1.7e-13	167	213	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L ++P + kK++Ka++L A++YIk+Lq Pd.00g536970.m01 167 DHIIAERKRREKLSQRFIALSAMVPGL-----KKMDKASVLGDAIKYIKQLQ 213 699**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MAISSIGGMS ELGMEDPYFI NQWHMNSLDE VSMLPLAAAF GENFNQSHFH PNFNLKTSMD 60 SSHSGIDRPM KQLKTDGWSS CKTDQHGLNP QVASSPNILS FVNSNSTNQM GVLKPKEEAA 120 VCSNSNNSLP SDILLSQSSF GNQSYLFKAS QGTKGVNTNT RLSTTQDHII AERKRREKLS 180 QRFIALSAMV PGLKKMDKAS VLGDAIKYIK QLQDKVKTLE EQTRKKNMES VVFVKKTQLF 240 ANDDNSSSEE NNSSGPFDET LPEIEARFCD NNVMIRIHCE KRKGVVEKTI AEVEKLQLKF 300 INSSVLTFGG CALDVTIIAQ MEVEFSLSVK ELVKNLRSAF DMFM

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MAISSIGGMS ELGMEDPYFI NQWHMNSLDE VSMLPLAAAF GENFNQSHFH PNFNLKTSMD  60
SSHSGIDRPM KQLKTDGWSS CKTDQHGLNP QVASSPNILS FVNSNSTNQM GVLKPKEEAA  120
VCSNSNNSLP SDILLSQSSF GNQSYLFKAS QGTKGVNTNT RLSTTQDHII AERKRREKLS  180
QRFIALSAMV PGLKKMDKAS VLGDAIKYIK QLQDKVKTLE EQTRKKNMES VVFVKKTQLF  240
ANDDNSSSEE NNSSGPFDET LPEIEARFCD NNVMIRIHCE KRKGVVEKTI AEVEKLQLKF  300
INSSVLTFGG CALDVTIIAQ MEVEFSLSVK ELVKNLRSAF DMFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	172	177	ERKRRE
2	173	178	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	7e-65	bHLH family protein