PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g532280.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 117aa MW: 13488.5 Da PI: 8.6267 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 50.7 | 3.7e-16 | 69 | 106 | 23 | 59 |
EEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 23 sYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +YY+C++ gCp++k+ver+ +dp ++++tYegeH+h Pd.00g532280.m01 69 GYYKCSTVrGCPARKHVERAPDDPAMLIVTYEGEHRHA 106 7****9888****************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 117 aa Download sequence |
MDSRNRYCQI RVLKRLEEAL RFLGDNCGLA IQWLEDIVEK NRVKKTIRVP AISSKIADIP 60 PDEYSWRKGY YKCSTVRGCP ARKHVERAPD DPAMLIVTYE GEHRHAPENV GLAFEST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.2 | 3e-38 | WRKY family protein |