PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g529340.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 252aa MW: 28057.5 Da PI: 8.0893 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.1 | 6.7e-21 | 58 | 107 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ kl+g Pd.00g529340.m01 58 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 107 59******9.**********965...5*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 252 aa Download sequence |
MVLQQQQEHQ QKEQIAALAS PASLQSQYQH QNPRTLKFLS PKAIPMKQVG APSKPTKLYR 60 GVRQRHWGKW VAEIRLPKNR TRLWLGTFDT AEEAALAYDK AAYKLRGDFA RLNFPHLKHQ 120 GALVSGDFGH YKPLHSSVDA KLQAICQSLA ANSAKQGKTG ELCSVAERKP AISSPSEVSL 180 KTELRGEWEL TGVECYRPEI SSSPSQSVES SAGSSSPESD ITFLEFSDSQ WDEAENFGLE 240 KYPSVEIDWS AI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G78080.1 | 3e-57 | ERF family protein |