PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g528830.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 400aa MW: 43301.4 Da PI: 8.6042

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g528830.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.6	7.5e-40	59	119	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+s Pd.00g528830.m01 59 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSA 119 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MDQDDGPPNT EDPTNMGILP DSNVNPMPPS MDEESPKSNT SKTENTEATN SQEKTLKKPD 60 KILPCPRCNS MDTKFCYYNN YNVNQPRHFC KACQRYWTAG GTMRNVPVGA GRRKNKNSAS 120 HYRHITISEA LQAAQIDAPN GAHHPALKSN GRVLSFGVDA PICDSMASVL NLADKKVLNG 180 TQNGFHKSEE RVIPTPCKGR ENGDDSSRAS SATVSKPQLQ NVNGFSSQIP CLPGVPWPYP 240 WNSAVPPPAF CPPGFPLSFC PAPYWNCGVP GTWNVPWFGP QPASPNQKSP SSGSNSPTLG 300 KHSRDGDILK PESLEKEEPS KQKSGRVLVP KTLRIDDPSE AAKSSIWATL GIKNDSISGG 360 GLFKAFQSKS DQKNIVSETS PALRANPAAL SRSLNFQESS

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MDQDDGPPNT EDPTNMGILP DSNVNPMPPS MDEESPKSNT SKTENTEATN SQEKTLKKPD  60
KILPCPRCNS MDTKFCYYNN YNVNQPRHFC KACQRYWTAG GTMRNVPVGA GRRKNKNSAS  120
HYRHITISEA LQAAQIDAPN GAHHPALKSN GRVLSFGVDA PICDSMASVL NLADKKVLNG  180
TQNGFHKSEE RVIPTPCKGR ENGDDSSRAS SATVSKPQLQ NVNGFSSQIP CLPGVPWPYP  240
WNSAVPPPAF CPPGFPLSFC PAPYWNCGVP GTWNVPWFGP QPASPNQKSP SSGSNSPTLG  300
KHSRDGDILK PESLEKEEPS KQKSGRVLVP KTLRIDDPSE AAKSSIWATL GIKNDSISGG  360
GLFKAFQSKS DQKNIVSETS PALRANPAAL SRSLNFQESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-109	Dof family protein