PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g528760.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 403aa MW: 43645.7 Da PI: 8.4761

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g528760.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.6	7.6e-40	62	122	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+s Pd.00g528760.m01 62 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSA 122 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MDQDDGPPNT EDPTNMGILP DSNVNPMPPS MDEESPKSNT SKTENTENTE ATNSQEKTLK 60 KPDKILPCPR CNSMDTKFCY YNNYNVNQPR HFCKACQRYW TAGGTMRNVP VGAGRRKNKN 120 SASHYRHITI SEALQAAQID APNGAHHPAL KSNGRVLSFG VDAPICDSMA SVLNLADKKV 180 LNGTQNGFHK SEERVIPTPC KGRENGDDSS RASSATVSKP QLQNVNGFSS QIPCLPGVPW 240 PYPWNSAVPP PAFCPPGFPL SFCPAPYWNC GVPGTWNVPW FGPQPASPNQ KSPSSGSNSP 300 TLGKHSRDGD ILKPESLEKE EPSKQKSGRV LVPKTLRIDD PSEAAKSSIW ATLGIKNDSI 360 SGGGLFKAFQ SKSDQKNIVS ETSPALRANP AALSRSLNFQ ESS

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MDQDDGPPNT EDPTNMGILP DSNVNPMPPS MDEESPKSNT SKTENTENTE ATNSQEKTLK  60
KPDKILPCPR CNSMDTKFCY YNNYNVNQPR HFCKACQRYW TAGGTMRNVP VGAGRRKNKN  120
SASHYRHITI SEALQAAQID APNGAHHPAL KSNGRVLSFG VDAPICDSMA SVLNLADKKV  180
LNGTQNGFHK SEERVIPTPC KGRENGDDSS RASSATVSKP QLQNVNGFSS QIPCLPGVPW  240
PYPWNSAVPP PAFCPPGFPL SFCPAPYWNC GVPGTWNVPW FGPQPASPNQ KSPSSGSNSP  300
TLGKHSRDGD ILKPESLEKE EPSKQKSGRV LVPKTLRIDD PSEAAKSSIW ATLGIKNDSI  360
SGGGLFKAFQ SKSDQKNIVS ETSPALRANP AALSRSLNFQ ESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-107	Dof family protein