PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g528650.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 330aa MW: 36903.3 Da PI: 7.3929 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.8 | 6e-19 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l+d ++++G g+W++ +++ g++R++k+c++rw++yl Pd.00g528650.m01 15 RGPWTPEEDRKLLDFIQLHGHGSWSSLPQKAGLKRCGKSCRLRWRNYL 62 89*********************************************7 PP | |||||||
2 | Myb_DNA-binding | 51.3 | 2.6e-16 | 68 | 112 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ Ed+ +++++++lG++ W++Ia++++ +Rt++++k++w+ + Pd.00g528650.m01 68 RGNFSLHEDQTIIQLHALLGNR-WSAIAAHLP-KRTDNDIKNYWNAH 112 89********************.*********.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MGKSTCFAAA SGIKRGPWTP EEDRKLLDFI QLHGHGSWSS LPQKAGLKRC GKSCRLRWRN 60 YLRPDIKRGN FSLHEDQTII QLHALLGNRW SAIAAHLPKR TDNDIKNYWN AHLKKRLAKI 120 GFDPVTHKPK TAILGSANGD PKKLSNLSHI VQWESARLQA EARLSKESEL HKSSAHQLLH 180 DQTASLTHDH LHHQFAPLVP QCLDILRASA WESLISMSTK SSSSDADAPT NHINGGQNQF 240 SFGYHHDVHE HGVNNISNFE GLTSDHQFSS MTEYDDSRAM SSMTTGSLGL NELIGQHCGT 300 ECSELFDALQ QYMGFEVVDG EAWTSLEQLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15310.1 | 1e-88 | MYB family protein |