PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g527770.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 385aa    MW: 43411.2 Da    PI: 5.1943
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g527770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.6e-12184231254
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        ++h + E  RR+++N ++  Lr+l+P++     +K + a++++ A++YIk+L
  Pd.00g527770.m01 184 ETNHYATEMHRRAQLNGKYKALRDLVPNP-----TKTDRASVVKYAIDYIKEL 231
                       689**************************.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MYEDTVGCNF DPNSMPESAE TMLNVNPLPS PRQVLMPSPS ETHKNNNFAV AKNLRLSIEE  60
ISYPRQQDHH AAVEIELQNE LGFNPYSTNT DQNNNSSHLL SFEQQTNWDT AGGVDAPPRT  120
VSSVQPPLHR ELYQSLFSSG GDEREGIGGV VYSDGINNGR QFENGVLEFS REMGSIGRGR  180
DVKETNHYAT EMHRRAQLNG KYKALRDLVP NPTKTDRASV VKYAIDYIKE LLWIVEELKI  240
WLVEKKRCGR ERHQTEQDGG AGDGESCKPL GDPQDQSYNN GSLRSSWLQR KYKDTEVDIR  300
IIDDEVSIKL VQTKKINSLL YVSKLLDELQ LDLHHAEGGH IGNSYSFLFN TKMHEESFLY  360
AKAIGDKLIE VLDGQYAAVP STSSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.15e-71bHLH family protein