PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g527710.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 427aa MW: 47568.1 Da PI: 6.5131 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.2 | 2.6e-12 | 226 | 272 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + E+ RR ++N ++ Lr llP++ +K + a+i+ +A++YIk+L Pd.00g527710.m01 226 TKHFATEKHRRVQLNGKYTALRNLLPHP-----TKSDRASIVGEAIDYIKEL 272 78**************************.....9****************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 427 aa Download sequence |
MRLSMEELSY PHQQDHHAAM EIELQNELGF NPYSTNTDQN NNSSHLVSFE QQTNWDNIHG 60 VHDQMQQQLQ DGANGAYPPT PDLLNLFSLP RCSPSSVLQN SSITFTNPNP KSSNFPNSLG 120 FLGDVHGGID TPPGTASSVL YDPLFHLNLP PQPPLFRELL QSLPHGYSLP GSRNGSLFTS 180 GGDEGEGIGG GVYSDGINNG RQFENGVLEF SREMGSIGRG RDVKGTKHFA TEKHRRVQLN 240 GKYTALRNLL PHPTKSDRAS IVGEAIDYIK ELLRTVEELK LLVEKKRCGR ERSKRRRTEQ 300 DGGAGDDESC NMKPLGDPHD QYGSLRSSWL QRKSKDTEVD IRIIDDEVTI KLVQRKKINL 360 LLYVSKLLDE LQLDLHHVAG GHIGNSYSFL FNTKMYEGSS LYASAIAQKL IEVLDKQYAA 420 VPPTNSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G31210.1 | 5e-87 | bHLH family protein |