PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g527710.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 427aa    MW: 47568.1 Da    PI: 6.5131
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g527710.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.22.6e-12226272354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++h + E+ RR ++N ++  Lr llP++     +K + a+i+ +A++YIk+L
  Pd.00g527710.m01 226 TKHFATEKHRRVQLNGKYTALRNLLPHP-----TKSDRASIVGEAIDYIKEL 272
                       78**************************.....9****************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    
MRLSMEELSY PHQQDHHAAM EIELQNELGF NPYSTNTDQN NNSSHLVSFE QQTNWDNIHG  60
VHDQMQQQLQ DGANGAYPPT PDLLNLFSLP RCSPSSVLQN SSITFTNPNP KSSNFPNSLG  120
FLGDVHGGID TPPGTASSVL YDPLFHLNLP PQPPLFRELL QSLPHGYSLP GSRNGSLFTS  180
GGDEGEGIGG GVYSDGINNG RQFENGVLEF SREMGSIGRG RDVKGTKHFA TEKHRRVQLN  240
GKYTALRNLL PHPTKSDRAS IVGEAIDYIK ELLRTVEELK LLVEKKRCGR ERSKRRRTEQ  300
DGGAGDDESC NMKPLGDPHD QYGSLRSSWL QRKSKDTEVD IRIIDDEVTI KLVQRKKINL  360
LLYVSKLLDE LQLDLHHVAG GHIGNSYSFL FNTKMYEGSS LYASAIAQKL IEVLDKQYAA  420
VPPTNSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.15e-87bHLH family protein