PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g524190.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 1002aa MW: 110481 Da PI: 8.1512 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.5 | 3e-08 | 495 | 543 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v + G+g+W+ I r Rt ++k++w+++l Pd.00g524190.m01 495 AWTLVEVIKLVEGVSKCGTGRWSEIKRLSFasySYRTSVDLKDKWRNLL 543 7**************************99999*99************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1002 aa Download sequence |
METVVGVEGS DEGKCEESGV EKSSSSLSSP KQIADPVVYK LVRVEGDGRL VPATDDEVME 60 VEEFLVDEKI EIPVVTDAGN VECISNEESS SGKSHKESSE GPSHSENTEP DAKLSARLEE 120 IVPSSDLSLD DSHINESARI GECSKPPDGP IESGSPASVI CNSSKPDFYT LKGEICMDNL 180 SIRELHGLFR ATFGRETTVK DKLWLKRRIA MGLTNSCDVS TTTFTIIDNK LVNKGTDNSF 240 QNADGMLTEG SDGEAKNLGY ETSPTSHSSQ MENHQIVLGK RLGNLSVELD CGSDDLQMEH 300 RGAKRVRKPT KRYIEELSEV ESRDYTPKVI GSAKNTGQGQ TSPKYCIRPP GNVPLNERTI 360 VTRLDSLGGS GVQVPFVSRV RRSRPRKNIM ALMKFDSSGM GVAAKLVQEA LSVRSSPPES 420 EHADKVLKVR SASEQIQPQF AAEPEKDKRR LVMSTIELGK NLGLKQTDSS EDNSDDGIAT 480 VPTAKGGMRR KHHRAWTLVE VIKLVEGVSK CGTGRWSEIK RLSFASYSYR TSVDLKDKWR 540 NLLKASFAQT PPDDGINSRK HASVPIPAAI LLKVRELAEM HAQLQRHRRQ LSHVVAAAKN 600 PATMGIIERI KEIEAEMART QKNKATEYHL GQLKAKIAKL RTQLLEPPKG SSGGGDGFEV 660 TKFGHGRVAL IGFPSVGKST LLTMLTGTHS EAASYEFTTL TCIPGIIHYN DTKIQLLDLP 720 GIIEGASEGK GRGRQVIAVA KSSDIVLMVL DASKSEGHRQ ILTKELEAVG LRLNKRPPQI 780 YFKKKKTGGI SFNSTLTLTH VDEKLCYQIL HEYKIHNAEL LFREDATVDD LIDVIEGNRK 840 YMKCVYVYNK IDVIGIDDVD KLARQPNSVV ISCNLKLNFD RLLAKMWEEM GLVRVYTKPQ 900 GQQPDFGDPV VLSSDRGGCS VGDFCNHIHR SLMKEVKYVL VWGTSARHYP QHCGLGHVLN 960 DEDVVQIVKK KDKEGEGRGR FKSHSTAPAR ISDREKKAPL KQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 381 | 387 | RRSRPRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72650.1 | 2e-95 | MYB_related family protein |