PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g524060.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GRF | ||||||||
Protein Properties | Length: 322aa MW: 36086.6 Da PI: 8.2113 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 45.4 | 1.4e-14 | 78 | 104 | 1 | 27 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkkl 27 d+epgrCrRtDGKkWRCs+++++++k+ Pd.00g524060.m01 78 DPEPGRCRRTDGKKWRCSKEAYPDSKY 104 79***********************98 PP | |||||||
2 | QLQ | 55.7 | 1.5e-19 | 14 | 47 | 2 | 35 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FT++Q+q+L++Q+l++Ky+a++ P+P +L+ + Pd.00g524060.m01 14 PFTPNQWQELEHQALIFKYMASGIPIPTDLVYSL 47 9*****************************9766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MLSGNPNTAR NRYPFTPNQW QELEHQALIF KYMASGIPIP TDLVYSLKRR LDNSISSRLF 60 PHPMGWSCYE MGFGRKVDPE PGRCRRTDGK KWRCSKEAYP DSKYSLSSPN NKNLSKTSSY 120 SLSPLSSSIS TETQTQNHPH QSNSPLYPFL NYPQSSSSSS RPPPGSVFSP QNNSSSATPH 180 LFLNSGSYNT QAEKDYRYLH GTKGSVDELA FFPESSANGR SILTGGSSSC QPLMSSYRGY 240 SQPQFQSLTD HHNPEVSQQS QEEEQHCFVW GTDFKSSKPI KTEKEAAETQ KSLHHFFGDW 300 QPPKSTDTWL DLSSNSGVPN DG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 2e-47 | GRF family protein |