PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g523140.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 466aa    MW: 52102.7 Da    PI: 8.6605
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g523140.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-18112161255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++  +++++g
  Pd.00g523140.m01 112 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDSEARRIRG 161
                       69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    
MCGGAIISDF IAPTRSRLTA DYLWPDLKKP SSGKRFSKPL RPEIVDLGDD FEADFQEFKD  60
ESDVDEDDEM VEAKPSAFSA GKPSSARGST TVKSVEFNGQ AEKSAKRKRK NQYRGIRQRP  120
WGKWAAEIRD PRKGVRVWLG TFNTAEEAAR AYDSEARRIR GKKAKVNFPD ETPRSSAKRS  180
VKASQKMLPK TNMNAIQPNL NQNINFVNDP NQDYYNAMGF LDEKPATNDF GFMSTFPANG  240
EVVLKSSAPS DAKEILVAFL LVVAGWFSLG LECKLLNMHK ASALIVIFIM KPQRPVFSLE  300
TVSLDLYMLE AYSDSTLFLS SAITLTLNAQ NPNKVGIWYS PSHLEVLDGG LHIGTIRIPS  360
FLQPAHSSNV SVEIRVLFPC LNVSQIVAEA SLQDDSRKNM FQMKIVGDVG AHLWVFHIIL  420
LKIKVALECD ISIDYKELTM KNEVRTIGVK HHTVCFTTLD HMVSFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.11e-50ERF family protein