PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g520610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 230aa    MW: 26130.1 Da    PI: 10.3236
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g520610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.11.4e-17131220198
                       EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                       f+k+++ps+v+   +l l  +f++eh  +    ++  +tl de+g+++   +  rk++    l++GWk+F+ a++L +gD +vF+l++r+ f 
  Pd.00g520610.m01 131 FVKTMLPSHVSGGFWLGLQVRFCKEHlpK----GDEVMTLIDEDGNEYPTIYLARKTG----LSGGWKGFAVAHDLVDGDALVFQLIRRTAF- 214
                       89************************543....4458***************656665....**************************9999. PP

                       .EEEEE- CS
                B3  92 lvvkvfr 98 
                        +v ++r
  Pd.00g520610.m01 215 -KVYILR 220
                       .777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MVMAKSKLSY EESRRQRLEE NKKRMEALNL PQLAQSLKTT SSPKPSPMKR TKPRTVEKQM  60
VVVRRSSRVA NLPTPVYKEV VVDRVMIPRK SYSSRHRDLS NRVYASDEAR AEAMERAEDL  120
ESGLGSDHPI FVKTMLPSHV SGGFWLGLQV RFCKEHLPKG DEVMTLIDED GNEYPTIYLA  180
RKTGLSGGWK GFAVAHDLVD GDALVFQLIR RTAFKVYILR VGRPEDGNKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.17e-65B3 family protein