PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g519760.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 866aa    MW: 95489 Da    PI: 6.2699
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g519760.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox24.45e-08811053757
                       C....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  37 l....gLterqVkvWFqNrRakekk 57 
                       +    +++ +q+kvWFqNrR +ek+
  Pd.00g519760.m01  81 CpilsNIEPKQIKVWFQNRRCREKQ 105
                       455569*****************97 PP
2START184.17.6e-581913992205
                       HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEE CS
             START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galq 92 
                       +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++l+v+s+g  g+++
  Pd.00g519760.m01 191 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDRPSWFRNCRSVDVLNVLSTGngGTIE 282
                       7899******************************************************.8888888888************************ PP

                       EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHH CS
             START  93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwll 181
                       l +++l+a+++l+p Rdf+ +Ry+  l++g++v++++S++++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++l
  Pd.00g519760.m01 283 LLYMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSmppVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL 375
                       *********************************************9988899***************************************** PP

                       HHHHHHHHHHHHHHHHHHTXXXXX CS
             START 182 rslvksglaegaktwvatlqrqce 205
                       r+l++s++  ++kt++a+l+++++
  Pd.00g519760.m01 376 RPLYESSTLLAQKTTMAALRNLRQ 399
                       ********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 866 aa     Download sequence    
MVKHEMRWGG GEEHVVKLRR SLHANPLSFF LASGHQAKLL SKPKREEAYI GRDDGGDVSL  60
QRWWDEDANG QWQVRKLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQTVNRKLT  120
AMNKLLMEEN DRLQKQVSQL VYENSYFRQQ TQNSNLATTD TSCESVVTSG QHHLTPQHPP  180
RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIVAISH GCTGVAARAC  240
GLVGLEPTRV AEILKDRPSW FRNCRSVDVL NVLSTGNGGT IELLYMQLYA PTTLAPARDF  300
WLLRYTSVLE DGSLVVCERS LNNTQNGPSM PPVQNFVRAE MLPSGYLIRP CEGGGSIIHI  360
VDHMDLEPWS VPEVLRPLYE SSTLLAQKTT MAALRNLRQI SQEVSQPNAA GWGRRPAALR  420
ALSQRLSKGF NEAVNGFTDE GWSILESDGV DDVTLLVNSS PGKMMGANLY ANGVPSMSNA  480
VLCAKASMLL QNVPPAILLR FLREHRSEWA DRSIDAYSAA AIKPGPCGLL GSRAGSFGDQ  540
VIHPLAHTIE HEEFMEVIKI ENMGHYREDM IMPAADIFLL QLCSGVDENS VGTCAELVFA  600
PIDASFSDDG PILPSGFRII PLDSRMDAPS PNRTLDLASA LEVGPAGSRA SGDNAGHSGN  660
TKSVMTIAFQ FAFEIHLQDN VASMARQYVR SIIASVQRVA LALSPSRFGS NSGFRPPPGT  720
PEAQTLAGWI CQSYMCYLGE DLLKSEGSES ILKSLWHHSD AILCCSLKAL PVFTFANQAG  780
LDMLETTLVA LQDITLEKIF DDNGRKTLFS EFPQIMQQGF MCLQGGICMS SMGRPISYER  840
AVAWKVLNEE ETAHCICFMF INWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32880.10.0HD-ZIP family protein