PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g519630.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 239aa    MW: 26422.2 Da    PI: 4.9829
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g519630.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.58.2e-1967117155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  Pd.00g519630.m01  67 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 117
                       68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MSSDQTQGSE TESSSNSFTS TTPPSSPSSL QNPLSVNLQK PNSPIHQEIE LPGKKNTKRG  60
RDSSKHPVYR GVRMRNWGKW VSEIREPRKK SRIWLGTFPT PEMAARAHDV AALSIKGNSA  120
ILNFPELSDS LPRPVSLAPR DVQAAASKAA QMHQFDANPS MSYNLSTESE ELSEIVELPS  180
LGYESTELRS EFVFVDSEDQ WVYPPPWLQR LGDCGGGYVC DELGTPSSSG FEGSLWEYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-74ERF family protein