PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g518610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 342aa    MW: 37317.1 Da    PI: 9.9095
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g518610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.83.5e-31274331359
                       -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp ++++tYegeH+h 
  Pd.00g518610.m01 274 DEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERAPDDPAMLIVTYEGEHRHA 331
                       9************************9888****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MAVELMNFPK MEDQKAIQEA ASQGLKSMEH LIRFLSHQQQ TNQSSRLDCT DITDHTVSKF  60
KKVISLLNRT GHARFRRGPV QPDQPVQFPS SSSHPSYSQT LSLAPALNPR PSQAPAPVTT  120
PAIVPPAPIE SSYVQSQPHI MTLDFTRPNV FASNPKSTEI EFAKESFSVS SSSSFMSSAI  180
TGDGSVSNGK QGSSIFLAPA PTASGAKPPL STAPFKKRCH EHDHHSDDAS CKYSGSGSAS  240
GSGKCHCSKR RKNRVKKTIR VPAISSKIAD IPPDEYSWRK YGQKPIKGSP YPRGYYKCST  300
VRGCPARKHV ERAPDDPAML IVTYEGEHRH APENVGLAFE ST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.21e-114WRKY family protein