PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g518600.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 88aa    MW: 9945.39 Da    PI: 9.6744
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g518600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.91.9e-322077359
                      -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY  3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                      D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp ++++tYegeH+h 
  Pd.00g518600.m01 20 DEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERAPDDPAMLIVTYEGEHRHA 77
                      9************************9888****************************6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MKKTIRVPAI SSKIADIPPD EYSWRKYGQK PIKGSPYPRG YYKCSTVRGC PARKHVERAP  60
DDPAMLIVTY EGEHRHAPEN VGLAFEST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.13e-50WRKY family protein