PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g515140.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 465aa MW: 51412.4 Da PI: 4.5409 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 85.9 | 3.1e-27 | 143 | 208 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r ++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg Pd.00g515140.m02 143 RFDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 208 6789******************************...99..****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 465 aa Download sequence |
MSGSRAHDPP AQPPQPIMQQ ALKRQLAFSS MKPPFSATAD YHGFVPDPRQ LTDSEAYGIY 60 VKPSQLKRKS DAADYEAESS DRTAAPGYTE AVTSPLQTPV SSKVGKANKT SRLTKCSRSG 120 PQTPASNVGS PSGANLTPAG PCRFDSSLGL LTKKFINLIK HAEDGILDLN NAADTLEVQK 180 RRIYDITNVL EGIGLIEKKL KNRIQWKGLD VSRTGDVDEN YPSLQAQVEN LSDEERRLDQ 240 QIREMQERLR DLSEDESNKK WLFVTEEDIK GLPCLQNETL IAIKAPHGTT LEVPDPDEAV 300 DYPQRRYRMV LRSTMGPIDV YLVSQFEEKF EEINGVEVPT DIPSSSGVNE NPATTMVTEN 360 RGKDVEIQGP DDHRMCADPT ASQDIMSGMM KIVPSDVDSD ADYWLLSDDA DISITDMWRT 420 EPGVVWNELG AIDEDYPMVN VSTPRPQTPP SSSTQVPATA NRTKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22220.2 | 1e-153 | E2F/DP family protein |