PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g511520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 284aa    MW: 32429.1 Da    PI: 5.6342
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g511520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.94.6e-131461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd +l + +   G ++W+ +++  g+ R++k+c++rw +yl
  Pd.00g511520.m01 14 RGPWTIEEDHKLMNFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYL 61
                      89******************************99************97 PP
2Myb_DNA-binding521.6e-1667110146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg++T+ E+ ++++++  lG++ W++Ia++++ gRt++++k++w++
  Pd.00g511520.m01  67 RGSFTETEENQIIQLHSCLGNR-WSKIASHFP-GRTDNEIKNHWNT 110
                       89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MGRQPCCDKV GLKRGPWTIE EDHKLMNFIL NNGIHCWRMV PKLAGLLRCG KSCRLRWINY  60
LRPDLKRGSF TETEENQIIQ LHSCLGNRWS KIASHFPGRT DNEIKNHWNT RIKKRLKHLG  120
VDPLTHKPIE QKENIEENKQ TVTREDSSSS ISQGQEESQD SGLEAKLQQD GNGNKGFPEF  180
NDKLQNVPEL AGFDETNDLL KNYEMFCGSL DLGTFLLNQG PNTNDTSTSN SYSTSSFSVE  240
ESNNPSISIG ESIQEHSLQK WVDSVDSMLS WDGFNNLEQD LFFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.11e-83MYB family protein