PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g506020.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 284aa MW: 31452.5 Da PI: 8.0811 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 105.5 | 2.8e-33 | 101 | 159 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s++prsYYrCt+ C vkk+vers++dp++v++tYeg+H+h+ Pd.00g506020.m01 101 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTVACGVKKRVERSSDDPSTVVTTYEGQHTHP 159 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MLGTVPSTVA LPERESTTSE VLNGSTAPTT PNSSSISSSS NEAAANKNED QTTTKAQDEE 60 ADEQNQDPEK TQKQLKPKKK NQKRQREPRF AFMTKSEVDN LDDGYRWRKY GQKAVKNSPY 120 PRSYYRCTTV ACGVKKRVER SSDDPSTVVT TYEGQHTHPS PITPRGTMGI APLPDQPCAF 180 SSSPFGVQQL LPHHHYQQQQ QQLQPQYSYI YSSAPSLNIS SPAYGGGAFN PSSFSTGLLQ 240 ERYNFGSPSS SSSAASNLLR DHGLLQDIVP QIRKEAKEED HLHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49520.1 | 2e-51 | WRKY family protein |