PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g501830.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 560aa MW: 61198.9 Da PI: 6.5217 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.1 | 3.7e-09 | 374 | 421 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Pd.00g501830.m01 374 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 421 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 560 aa Download sequence |
MENEFFLNAG IPPPLHFEQT SSMPAWRSSF STAMDIQATA TADRNCSSEQ SPDRFYNPNW 60 DKSADQNIHF ESALSSMVSS PAASNSNISN ESFVIRELIG KLGNIGSSGE ISPHSQSLLG 120 IQANTYMGRN GNGNASTNTS CYSTPLNSPP KLSLPIMDHH LKKEKLPNMG KPMPLNSSVA 180 EFSADPGFAE RAAKFSCFGS RSFNGRTTQL GMNNNNSSSN NNTELPYRSN AIMGNGKLPR 240 VSSSPALKAL GSQTGLQEKM NSLLQDRNEL PISREESTLS EQNPNGETGL AASNSMDLNS 300 RKRKSGAELN DNSNAKRSKP NENNGNDQNG SVKAEDTKGS TSSDEKQTRT GPKPPEPPKD 360 YIHVRARRGQ ATDSHSLAER VRREKISERM KLLQDLVPGC NKVTGKALML DEIINYVQSL 420 QRQVEFLSMK LASVNTRLDF NVDALMSKEI FQQNNSLPQH PIFPLDSSAQ AIYGHQRQQN 480 PALQNNISNG AVDPLDTSLC QSLGMQLPPL SGFNSEGIPQ FPAFGEDDLQ TIVQMGYGQN 540 PNRETELDGS NQVSHMKIEL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 300 | 305 | SRKRKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07340.1 | 1e-117 | bHLH family protein |